species:   Drmel
pid:       MI0000125
parent:    dme-mir-6-2
paralog:   
locus:     NT_033778.4:19660869-19660942
matures:   ['UAUCACAGUGGCUGUUCUUUUU', 'AGGGAACUUCUGCUGCUGAUAUA']
srr:       SRR11906543
genome:    /Users/jax/+Genomes/Animal_genomes/Drmel.GCF_000001215.4_Release_6_plus_ISO1_MT_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Drmel.SRR11906543.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Drmel.SRR11906543.cram NT_033778.4:19660869-19660942

0 out of bounds
18 alignments
18 proper strand
17 stranded perfect matches

     *************************               ************************     
UAACCCAAGGGAACUUCUGCUGCUGAUAUAUUAUUGAAAAACUACUAUAUCACAGUGGCUGUUCUUUUUGGUUG
(((((.((((((((..((((((.(((((((.((((....)).)).)))))))))))))..)))))))).)))))
-----------------------------------------------UAUCACAGUGGCUGUUCUUUUU----- l=22 a=11 c
-------AGGGAACUUCUGCUGCUGAUAUA-------------------------------------------- l=23 a=0 c*
-----------------------------------------------UAUCACAGUGGCUGUUCUUUUU----- l=22 a=11 ma
-------AGGGAACUUCUGCUGCUGAUAUA-------------------------------------------- l=23 a=0 ma*

-----------------------------------------------UAUCACAGUGGCUGUUCUUU------- l=20 a=1 
-----------------------------------------------UAUCACAGUGGCUGUUCUUUU------ l=21 a=4 
-----------------------------------------------UAUCACAGUGGCUGUUCUUUUU----- l=22 a=11 (c,ma)
-----------------------------------------------UAUCACAGUGGCUGUUCUUUUUa---- l=23 a=1 
-----------------------------------------------UAUCACAGUGGCUGUUCUUUUUG---- l=23 a=1 

mb-01011
ax-1011111
ku-01
ss-111111111110
fn-111
